Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791242.1_cds_XP_016506156.1_1866
CDS Infomation

[gene=LOC107823950] [db_xref=GeneID:107823950] [protein=uncharacterized protein LOC107823950 isoform X2] [protein_id=XP_016506156.1] [location=complement(join(54449..54541,55617..56456,56600..56680,56810..56899,57764..57873,57979..58081,58302..58475,58690..58765,59085..59169,59261..59455,67063..67172,67299..67351))] [gbkey=CDS]
Sequence

ATGTCAATGGCGCGAGGCTTCTTTGTTTGTCCACAGACTAAAAACTCTTCACACCGTTGC
AGTACTCACCGCCAAGAAAATGTACCAATCGACATGTCAGCATACTCAGACACATTTGCA
AAACGTATGGCTATGGCTGGTCTCAAACCCCATCATCGTATTGTTTTGGGAGTCTCTGGT
GGCCCTGATAGCATGGCCCTCTGTGTGTTAACTGCTGCATGGAAAACCAATAGCCTTGGT
ATTGCTGCTCAAAAGAATGAGTTCATTGACGGGCTTTTGGCAGTGGTAGTTGATCATGGA
CTGCGTGCTGAGAGTAAAGATGAGGCCAACCTTGTTCACCGTCGAGTCACAAGCATGGGG
ATCAAATGTGAGATTGCTTGCTGTGAATGGTCAGAAGGCAAGCCGAAGCAGGGTCACTTG
CAAGAAGCAGCTCGCGAGAAGAGGTATGAAATTCTCCAAAGTGCTAGCATCCGGCATCAG
ATTGGTGTGTTGATGACTGCACACCATGCAGATGACCAGGCGGAACTATTCATTCTCAGG
TTATCTCGTAATAGTGGTGTGCTTGGACTTGCCGGAATGGCATTTGTTTCACAGCTGTTC
TGTACATGTCCAGATTTAAGTGCTGAAGCGAGTGGCGAAGGAATTTTATTGGTGAGACCT
CTGCTGGAGTTCTCTAAAGAAGATATGTATAAGATATGTCTAGGTGCCAATCAAGAATGG
GTTGAAGATCCCACAAACAGAAGCGCATTATTTACTCGTAATAGAATTCGTATGACATTG
ACTGACCTGGCATCACCTATCTTCAGATCCGAATTGCAAGCACTTATTGCTGCTTGTCGG
AGAACAAGGTCGCATGTTGACAAAATGTGTTCCAACCTGTTGCATCAAGCTGTGACCATC
ATGCCTGAAGGGTATGCAGTGATTGATTTAGGAATCCTCAGGCCTTCAGATTTAAAGGAC
ATAGTTCTCTCCAAGTTTATTGCTTTGTTGTTGCAGTTTGTTTCACAAAGGCAAAGACCT
GTCAGAGGCAGAGCATCAAAATTAGTGTTAAACTACATTCGGACTTCCCCATGCAAGACT
GCTGTTACTGCATCTGGTTGTTACCTTTGTCCTGCTCCTGGCTCCAGAGGCACTCAAGTA
TTGGTTTGCCGCTCTACTGATGCTGATTTGACTCTAGAGTTCCTAAATCCATACTTGACT
GAAGGAAAAAACTGCTCTATTTCAAATGAGGTAAAGCAAATTGTAGCAAATGGAAGGTCA
TACTCGGATCAGTTCCCTCAAAGTACACTAGCAATGCAATTTTTGGACCTAACATCTTCT
GATTCCATTCTAGCTGAAGCCAAAAGGGAAGGCATTCTTAGTGAATCTACCTACAAGAGC
ATTATTTCTCTACAGAGAGAGGAAAGCAATAATTTCGTGTCTAAAACTAATATTGTGCTT
GAAAATAAGGTGGAGCACAAAGTAGAATATGCAGCTTCTGCTCCAAGCAAAGTACTCCGT
CCTGAAAAAGTTGGCTACTTCATGAACAGATTTATAGTGAAGTGGAATCTGAGCAAGCAA
AATGCTTGCACTTCATTTTCCACGAATAACTCCAATCAATTCCAAGATTTCAGGGAAGAA
TGGAACTTTTGCAACTCTTGTGTCGTTGGCTATGATCGGCTGGCCAGTGTCCGTTACATG
GTTGATGCTGATTGGTTGTATCTGGCGACGTTATCAAAGAGAGAGGATAGCTGCAGTGTT
CATGAAGAACTTTCCCTTTCTGTGGAGTCACGAGTAATGAGCAACATAAACTTGTGTTCT
GCTTGTACAAAGAAATCAGCTGAAAGAGCTCTCCTCTTATTGAAGTCCATTCCAGTCGCA
GCAAGAAGAGCTTTACCTGTCTTAGTCAATGTGGATGGGGTGTTGCTAAGCATACCAAGT
GTGGGCTTCCAGCACTGTCCTTGCTTGGTGGCATCAGCAACGTATAAGCCAAAAATACCG
TTGGGTGGAGGTTACAATTCATTCCTCTAG

Peptide Sequence

PEP ID

XP_016506156.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107823950 isoform X2 [Nicotiana tabacum]
Sequence

MSMARGFFVCPQTKNSSHRCSTHRQENVPIDMSAYSDTFAKRMAMAGLKPHHRIVLGVSG
GPDSMALCVLTAAWKTNSLGIAAQKNEFIDGLLAVVVDHGLRAESKDEANLVHRRVTSMG
IKCEIACCEWSEGKPKQGHLQEAAREKRYEILQSASIRHQIGVLMTAHHADDQAELFILR
LSRNSGVLGLAGMAFVSQLFCTCPDLSAEASGEGILLVRPLLEFSKEDMYKICLGANQEW
VEDPTNRSALFTRNRIRMTLTDLASPIFRSELQALIAACRRTRSHVDKMCSNLLHQAVTI
MPEGYAVIDLGILRPSDLKDIVLSKFIALLLQFVSQRQRPVRGRASKLVLNYIRTSPCKT
AVTASGCYLCPAPGSRGTQVLVCRSTDADLTLEFLNPYLTEGKNCSISNEVKQIVANGRS
YSDQFPQSTLAMQFLDLTSSDSILAEAKREGILSESTYKSIISLQREESNNFVSKTNIVL
ENKVEHKVEYAASAPSKVLRPEKVGYFMNRFIVKWNLSKQNACTSFSTNNSNQFQDFREE
WNFCNSCVVGYDRLASVRYMVDADWLYLATLSKREDSCSVHEELSLSVESRVMSNINLCS
ACTKKSAERALLLLKSIPVAARRALPVLVNVDGVLLSIPSVGFQHCPCLVASATYKPKIP
LGGGYNSFL

Transcript Sequence

Gene sequence data has not been registered.